- Lima, L. L.; Wanner, E. F.; Atman, A. P. F., Understanding the Role of Daily Activities in the Transmission of COVID-19 in Urban Settings Using an Agent-Based Model, Complex Systems, 33(3), 2024 pp. 333–352.
- Lima, L. L.; Atman, A. P. F. Impact of mobility restriction in COVID-19 superspreading events using agent-based model. PLoS One, v. 16, p. e0248708, 2021.
- Lima, L. L.; Atman, A. P. F. Complexity in the dengue spreading: A network analysis approach. PLoS One, v. 18(8), e0289690, 2023.
- Puga-Gonzalez, I.; Gürcan, Ö.; Falck, V.; Frantz, C.; Shults, F. L.; Herbert, D.; Lima, L. L.; Grendstad-Rousseau, M., “A Multi-Level Agent-Based Architecture for Climate Governance Integrating Cognitive and Institutional Dynamics,” arXiv preprint arXiv:2605.07683, 2026.
- Rettore, C.; Lima, L. L.; Puga-Gonzalez, I.; Pini, F.; Szwed, P.; Antosz, P.; Vittuari, M., A Bite Too Much: Scenario-Based Analysis of Simulated Plate Waste Behaviour at a Hotel Breakfast Buffet, Cleaner and Responsible Consumption, 2026 pp. 100435.
- Puga-Gonzalez, I.; Lima, L. L.; Antosz, P.; Carrella, E.; Iori, E.; Rettore, C.; Rousseau, M. G.; Shults, F. L.; Vittuari, M., To eat or not to Eat: Modeling food waste behavior at a hotel breakfast buffet, Cleaner and Responsible Consumption, 2025 pp. 100333.
- Lima, L. L.; Atman, A. P. F., Dengue Serotypes Cyclicity Evidenced by the Impact-Frequency Histogram, Complex Networks XVI: Proceedings of the 16th Conference on Complex Networks, CompleNet 2025, 2025 pp. 83.
- Lopes, A. A. S.; Lima, L. L.; Magalhães, A. S.; Andrade, A. C. S.; Canelas, T.; Foley L.; Oni; T.; Caiaffa, W. T. What is the cross-sectional association of geospatially derived walkability with walking for leisure and transport? PLoS One, 20(3): e0320202, 2025.
- Garcia, L.; Hafezi, M.; Lima, L.; Millett, C.; Thompson, J., Wang, R.; et al. Future-proofing cities against negative city mobility and public health impacts of impending natural hazards: a system dynamics modelling study. The Lancet Planetary Health, 9 (3), e207-e218, 2025.
- Sousa Filho, J. F.; Silva, U. M., Lima, L. L.; Paiva, A. S. S.; Santos, G. F.; Andrade, R. F. S.; Gouveia, N.; Silveira, I. H.; Friche, A. A. ; Barreto, M. L.; Caiaffa, W. T. Association of urban inequality and income segregation with COVID-19 mortality in Brazil. PLoS One, v. 17 (11), e0277441, 2022.
- Cunha, M. C. M; Ju, Y.; Morais, M. H. F.; Dronova, I., Ribeiro, S. P.; Bruhn, F. R. P.; Lima, L. L.; Sales, D. M.; Schultes, O. L.; Rodriguez, D. A.; Caiaffa, W. T. Disentangling associations between vegetation greenness and dengue in a Latin American city: Findings and challenges. Landscape and Urban Planning, v. 216, p. 104255, 2021.
- Marques, A. R.; Lima, L. L.; Garcia, Q. S.; Atman, A. P. F. A novel cellular automata approach: seed input/output of the alien species Leucaena leucocephala in the soil and the effects of climate changes. Plant Ecology, v. 221, p. 141-154, 2020.
- Silva, K. J. S.; Lima, L. L.; Nunes, G. S. Sabogal-Paz, L. P. Visibility graph analysis of particle size distribution during flocculation for water treatment. Water Air Soil Pollut. 232, 86, 2021.
- Sousa Filho, J. F.; Santos, G.F. ; Ribeiro, L. C. de S. ; De Cerqueira, R.B. ; Lima, L. L. Global value chains and intra-BRICs trade in value-added. Journal of Government and Economics, v. 16, p. 100127, 2024.
Book chapters:
- Lima, L. L.; Atman, A. P. F. Covid-19 Superspreading Events Network Analysis from Agent-Based Model with Mobility Restriction. Trends in Biomathematics: Chaos and Control in Epidemics, Ecosystems, and Cells. 1ed.: Springer International Publishing, 2021, p. 333-343.
- Cunha, M. C. M.; Morais, M. H, F.; Lima, L. L.; Almeida, A. S.; Caiaffa, W. T. Recorrência de Dengue em 24 anos de observação na cidade de Belo Horizonte, Brasil. Anais do 11 º Congresso Brasileiro de Epidemiologia. Vol 2, 2021 – 141238.
- Lima, L. L.; Atman, A. P. F. Paths for Emergence of Superspreaders in Dengue Fever Spreading Network. In: Cherifi, H., Mantegna, R.N., Rocha, L.M., Cherifi, C., Miccichè, S. (eds) Complex Networks and Their Applications XI. Complex Networks 2016-2022. Studies in Computational Intelligence, vol 1077. Springer, 2023, pp 600–609.
- Gürcan, Ö., Falck, V., Rousseau, M.G., Lima, L.L. Towards an LLM-Powered Social Digital Twinning Platform. In: Mathieu, P., De la Prieta, F. (eds) Advances in Practical Applications of Agents, Multi-Agent Systems, and Computational Social Science: The PAAMS Collection. vol 16031. 2026. Springer.
Conference Proceedings:
- Lima, L. L.; Atman, A. P. F., Dengue Serotypes Cyclicity Evidenced by the Impact-Frequency Histogram of the Visibility Graph, International Conference on Complex Networks, Springer Nature Switzerland, 2025 pp. 83–93.
- Lima, L. L.; Atman, A. P. F. Computational Model of Zika Virus Infection in Urban Area. In: XXI Encontro Nacional de Modelagem Matemática Computacional (ENMC) e IX Encontro de Ciência e Tecnologia de Materiais (ECTM) 2018, 2018, Búzios. Anais do XXI ENMC. Encontro Nacional de Modelagem Computacional e IX ECTM. Encontro de Ciências e Tecnologia de Materiais. Campos dos Goytacazes: Essentia Editora, 2018.
- Cunha, M. C. M.; Morais, M. H, F.; Lima, L. L.; Almeida, A. S.; Caiaffa, W. T. Recorrência de Dengue em 24 anos de observação na cidade de Belo Horizonte, Brasil. Anais do 11 º Congresso Brasileiro de Epidemiologia. Vol 2, 2021 – 141238.
- Ribeiro, T. C. ; Oliveira, W. N. ; Lima, L. L. ; Lima, A. O. ; Guimarães, A. R. M. Caracterizacão da qualidade do sedimento associado as raízes de Eichhornia crassipes utilizando macroinvertebrados bentônicos como bioindicadores em lagoa artificial no sudeste do Brasil. XXXIV Congreso Interamericano de Ingeniería Sanitaria y Ambiental, 2014, Monterrey. XXXIV Congreso Interamericano de Ingeniería Sanitaria y Ambiental, 2014. p. 7-12.
Conferences Presentations:
- Lima, L. L.; Rettore, C.; Carrella, E.; Rousseau, M. G.; Pini, F.; Vittuari, M.; Antosz, P., The Home Cook Model: A Microsimulation Approach to Reducing Household Food Waste, Social Simulation Conference 2025, Delft, Netherlands, 2025.
- Lima, L. L.; Atman, A. P. F. Dengue serotypes cyclicity evidenced by the impact-frequency histogram of the visibility graph. International Conference on Complex Networks - CompleNet. 2025.
- Lima, L. L.; Atman, A. P. F. COVID-19 superspreading events network analysis from an agent-based model with mobility restriction. 20st International Symposium on Mathematical and Computational Biology – BIOMAT. 2020.
- Lima, L. L.; Atman, A. P. F. Modelo baseado em agentes para avaliação de eventos de superespalhamento de COVID-19 em cenários de restrição de mobilidade. 2nd Fluminense Meeting of Women in Biomathematics. 2020.
- Lima, L. L.; Atman, A. P. F. Modelo Computacional da Dispersão dos Sorotipos de Dengue. In: XXXVIII Congresso Nacional de Matemática Aplicada e Computacional 2018, 2018, Campinas. XXXVIII CNMAC. São Carlos: Sociedade Brasileira de Matemática Aplicada e Computacional, 2018.
- Lima, L. L.; Atman, A. P. F. Computational Model of Zika Virus Infection in Urban Area. XI National Meeting of Computational Modeling. Brazil, 2018.
- Lima, L. L.; Atman, A. P. F. Modelo Computacional da Dispersão dos Sorotipos de Dengue. National Congress of Applied and Computational Mathematics. Brazil, 2018.
- Lima, L. L.; Guimarães, A. R. M.; Atman, A. P. F. Modelo Computacional da Dinâmica do Banco de Sementes de Leucaena leucocephala. Mostra Específica de Trabalhos e Aplicações. Brazil, 2015.
- Cunha, M. C. M. ; Morais, M. H. F. ; Lima, L. L. ; Schultes, O. L. ; Almeida, A. S. ; Caiaffa, W. T. . Dengue history in a large metropolis: spatio-temporal analysis in Belo Horizonte and vector monitoring by ovitraps, 1996-2019. Planetary Health Annual Meeting and Festival, 2021.
- Ribeiro, T. C.; Oliveira, W. N. ; Lima, L. L. ; Lima, A. O. ; Guimarães, A. R. M. Caracterização da Qualidade do Sedimento Associado às Raízes de Echhornia Crassipes Utilizando Macroinvertebrados Bentônicos como Bioindicadores em Lagoa Artificial no Sudeste do Brasil. Mostra Específica de Trabalhos e Aplicações. Brazil, 2014.
- Lima. L. L. Microsimulation in Public Health. Invited talk: ECR Webinar Series - Methods in Public Health Research. University of Antwerp, Belgium. June 2026.
Reports:
- Urbane Project: Deliverable D4.2. Karlsruhe Demonstrator. December 2025. <https://urbane-horizoneurope.eu/wp-content/uploads/2026/01/URBANE_D4.2_Karlsruhe_Demonstrator_final.pdf >
- Chorizo Project: Deliverable D3.5. FLW Rapid Appraisal/Visualizer Tool. June 2025. < https://chorizoproject.eu/wp-content/uploads/2025/10/CHORIZO_D3.5_Rapid-Appraisal-Visualizer-Tool.pdf >
- Chorizo Project: Deliverable D3.4. 0FLW Impact scenarios. November 2024. < https://chorizoproject.eu/wp-content/uploads/2024/12/D3.4-0FLW-impact-scenarios.pdf >
- InfoCOVID: Periodic reports of COVID-19 in Belo Horizonte - MG, Brazil. 2020-2022. <https://www.medicina.ufmg.br/coronavirus/informacao/infocovid/>